!!NA_MULTIPLE_ALIGNMENT 1.0 Multiple Sequence Alignment Results
Symbol comparison table: pileupdna.cmp CompCheck: 6876 GapWeight: 5 GapLengthWeight: 1 human_upstre_pileup_37541.txt MSF: 799 Type: N April 10, 2003 09:04 Check: 8648 .. Name: mouse_upstream_4 Len: 799 Check: 3162 Weight: 1.00 Name: rat_upstream_4 Len: 799 Check: 66 Weight: 1.00 Name: human_upstream_4 Len: 799 Check: 5420 Weight: 1.00 // 1 50 mouse_upstre ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ rat_upstream ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ human_upstre ggtgtgcgga gcccgattgt cactcagctc ctgcgccggg ggcgacagag 51 100 mouse_upstre ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ rat_upstream ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ human_upstre ccgcaggcgc ccgagtcgag tcccagccag ctaccatccc tctggagctt 101 150 mouse_upstre ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ rat_upstream ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ human_upstre accggccggc cttggcttcc ccagGAATCC CTGGAGCTAG CGGCTGCTGA 151 200 mouse_upstre ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ rat_upstream ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~gtg human_upstre AGGCGTCGAG GTGTGGGGGC ACTTGGACAG AACAGTCAGG CAGCCGGGAG 201 250 mouse_upstre ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ rat_upstream gccaggagct ctgccagctt tggtgtgacc ttgggtaagt ctgtggctca human_upstre CTCTGCCAGC TTTGGTGACC TTGGgtaagt ctgagtctcg gttcacccct 251 300 mouse_upstre ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~t rat_upstream gttcgtgcac cacgaatgtg caggaaaggg gtggatgaaa cgactgggat human_upstre ggggctcccc aatgggggtg caggagaggg ttgaaagaag agaccggaat 301 350 mouse_upstre gtcccccttg gggcagtcga tgggtaagga ttctgggcag agctggagct rat_upstream cccccacttg gggcagtcaa tgggcaagga ttctgggcag agctgaagcg human_upstre g.cccccttg gggcaggcca tgggcaaggt tccccgacag agctggaacg 351 400 mouse_upstre ggaccaggct tctgttaaga atcgggcacc agcggcgtcc caggtgggtg rat_upstream ggaccaggct actgttaaga ttcgggcacc ggcggcgtcc caggtgggtg human_upstre ggaccagagg actgctaaga tccaggcacc agacgggtct caagtgggtg 401 450 mouse_upstre ggcacagggt aggcgtgcgc gcacgcgggg aatgggagcc ggtggacccg rat_upstream ggcacagggt aggcgtgcgc gcacgcgggg aatgggagcc cgtggacccg human_upstre ggcgcagggc aggtgcgggc acgc.tgggg aatagggaga aacgccccag 451 500 mouse_upstre ccaggtcctg ggcttagtcc ctcagaatca cgcctgccat ccagtcccag rat_upstream gcaggtcctg ggcttagtcc ctcagaatca cgcctgccat ccagtcccag human_upstre ccttgtcctg ggctccgtcc ccagacccac gtctgccacc ccagtcccag 501 550 mouse_upstre gtacgaaaca ggggcactac ctctttaaag gcgtccgggg ctgagcctct rat_upstream gtatgaaaca ggggcactac ctctttaaac gcgtccgggg ctgagcctct human_upstre gtgcgaaaca ggggcgctac ctctttaaaa gcgtccgggg ctgagtctct 551 600 mouse_upstre gccacaccat gtgattgctt gaaaggccgg gctgggagcg cagcggcggg rat_upstream gccacaccat gtgattgctt gaaaggccgg gctgggagcg cagcggcggg human_upstre gccgtaccat gtgattgctt gaaag~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 601 650 mouse_upstre agcctggaga acgatgagcc gatgcgcgcg cggtgcccag aacccaaccc rat_upstream agcctggaga acgatgagcc gatgcgcgcg cggtgcccag agcccagccc human_upstre ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 651 700 mouse_upstre tgcccggcgc ggctccggaa agccgcccgg ggaacttagg gcaacgcctt rat_upstream tgcccggcgc ggctccggaa agccgcccag ggaacttagg gcaacgc~~~ human_upstre ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 701 750 mouse_upstre tgggaccccc taccggttgg caggcaggat ggtgagctcc ttgcctccgg rat_upstream ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ human_upstre ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ 751 799 mouse_upstre gtcggcggac acctgtgggc actgtggatt cacaggggat ccttgtgga rat_upstream ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~ human_upstre ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~