GAP of: human_upstream_5 check: 4877 from: 1 to: 530
to: mouse_upstream_5 check: 9419 from: 1 to: 554
Symbol comparison table: nwsgapdna.cmp CompCheck: 8760
Gap Weight: 50 Average Match: 10.000
Length Weight: 3 Average Mismatch: 0.000
Quality: 2662 Length: 634
Ratio: 5.023 Gaps: 7
Percent Similarity: 69.333 Percent Identity: 69.333
Match display thresholds for the alignment(s):
| = IDENTITY
: = 5
. = 1
human_upstream_5 x mouse_upstream_5 April 12, 2003 23:52 ..
. . . . .
1 cgtaccatgtgattgcttgaaagGCCGGGCTGGGAGCGCTGCGGCGGGAG 50
|
1 ..............................................gagc 4
. . . . .
51 CCGGAGGACTATGAGCTGCCGCGCGTTGTCCAGAGCCCAGCCCAGCCCTA 100
| |||| || |||||| | ||||| | | | | |||| ||||
5 ctggagaacgatgagccgatgcgcg.cgcggtgcccagaacccaaccctg 53
. . . . .
101 CcGCGCGCGGCCCGGAGCTCTGTTCCCTGGAACTTTGGGCACTGCCTCTG 150
|| ||||||| | | || ||||||| ||||| |||| ||
54 cccggcgcggctccggaaagccgcccggggaacttagggcaacgcctttg 103
. . . . .
151 GGA.CCCCTGCCGGCCAGCAGGCAGGATGgtgagctccctgcatcctgtt 199
||| ||||| |||| ||||||||||||||||||||| ||| ||| | |
104 ggaccccctaccggttggcaggcaggatggtgagctccttgcctccgggt 153
. . . . .
200 ctgtgcacaggggtgggcagagccagtcatgggagacccctctgtgcgtg 249
| | | ||| ||||||| | | | | ||| | ||
154 cggcggacacctgtgggcactgtggattcacaggggatccttgtggaGTA 203
. . . . .
250 tgtctgtgtgtgcgcgcgcgctgggagctgcctcacacctgataaaaaag 299
|| | | |||||| |||||||||||||| ||||
204 AGT..............GTACAGGGAGCCACCTCACACCTGATACAAAAA 239
. . . . .
300 ccagtggaggagtgagcgctgctattttaagttgctgaatggaacctctg 349
||||||| |||||||| ||||||||||||||||||||||||||||||||
240 CCAGTGGTGGAGTGAGTGCTGCTATTTTAAGTTGCTGAATGGAACCTCT. 288
. . . . .
350 ggaatgataaagggaagggacaaagattaggcagaga.agggtccgggtg 398
|| || || |||| |||||| || ||| ||||| | | | | | |||
289 ..AAGGACAAGGGGAGGGGACAGAGGTTAAGCAGATAGTGAGCCTGAGTG 336
. . . . .
399 cccctccagcctgggtaggagctgcatgtgacaagtgggacacatcacag 448
| ||||| |||| ||| |||||| | |||| ||||||
337 TCTGGCCAGCTTGGGCAGGCACTGCATCACTTTACTGGGGCACATC.... 382
. . . . .
449 ggtacctggagttccagggcagcctgagctccctgcccctcccagacggg 498
||| || | | |||| || |||||| | ||
383 ...........TTCGCAGGGCTGCCTATGTCCCCCTCCTTCCCAGGCTGG 421
. . . . .
499 tctccccatcccaggcttccctgaccacacag.................. 530
|||||| | ||||||| ||||||||||
422 CATCCCCACCGCAGGCTT.CCTGACCACAGGTGCTGGCCTCGCGCCCCAG 470
.
.
.