GAP of: human_upstream_5 check: 4877 from: 1 to: 530
to: rat_upstream_5 check: 658 from: 1 to: 500
Symbol comparison table: nwsgapdna.cmp CompCheck: 8760
Gap Weight: 50 Average Match: 10.000
Length Weight: 3 Average Mismatch: 0.000
Quality: 1661 Length: 532
Ratio: 3.322 Gaps: 4
Percent Similarity: 38.755 Percent Identity: 38.755
Match display thresholds for the alignment(s):
| = IDENTITY
: = 5
. = 1
human_upstream_5 x rat_upstream_5 April 12, 2003 23:56 ..
. . . . .
1 cgtaccatgtgattgcttgaaagGCCGGGCTGGGAGCGCTGCGGCGGGAG 50
|| | | | | | || | || |||
1 ......atcccccacttggggcagtcaatgggcaaggattctgggcagag 44
. . . . .
51 CCGGAGGACTATGAGCTGCCGCGCGTTGTCCAGAGCCCAGCCCAGCCCTA 100
| | || | || | | | | || || | || |
45 ctgaagcgggaccaggctactgttaagattcgggcaccggcggcgtccca 94
. . . . .
101 CcGCGCGCGGCCCGGAGCTCTGTTCCCTGGAACTTTGGGCACTGCCTCTG 150
| ||| | | | | | | | || | | |
95 ggtgggtgggcacagggtaggcgtgcgcgcacgcggggaatgggagcccg 144
. . . . .
151 GGACCCCTGCCGGCCAGCAGGCAGGATGgtgagctccctgcatcctgttc 200
| ||| || || | | | | || | || | | | |
145 tggacccggcaggtcctgggcttagtccctcagaatcacgcctgccatcc 194
. . . . .
201 tgtgcacaggggtgggcagagccagtcatgggagacccctctgtgcgtgt 250
|| | | ||| | || | ||||| | |
195 agtcccaggtatgaaacaggggcact..........acctctttaaacgc 234
. . . . .
251 gtctgtgtgtgcgcgcgcgctgggagctgcctcacacctgataaaaaagc 300
||| | | || || || | || ||||
235 gtccggggctgagcctctgc.........cacaccatgtgattgcttgaa 275
. . . . .
301 cagtggaggagtgagcgctgctattttaagttgctgaatggaacctctgg 350
| | | | |||||| || | || ||| | |
276 aggccgggctgggagcgcagcggcgggagcctggagaacgatgagccgat 325
. . . . .
351 gaatgataaagggaagggacaaagattaggcagagaagggtccgggtgcc 400
| | | | | || | | | || ||||| |
326 gcgcgcgcggtgcccagagcccagccctgcccggcgcggctccggaaagc 375
. . . . .
401 cctccagcctgggtagg..agctgcatgtgacaagtgggacacatcacag 448
| |||| |||| | | | | | | ||
376 cgcccagggaacttagggcaacgcctttgggaccccctactggttggtag 425
. . . . .
449 ggtacctggagttccagggcagcctgagctccctgcccctcccagacggg 498
| ||| | | ||| | | | ||| | || |
426 gcaggatggtgagctccttgcctctgggtagcggacacctgtgggccgcg 475
. . .
499 tctccccatcccaggcttccctgaccacacag 530
| || | || ||| || |
476 tggatgca..caggggatccttgtgga..... 500